Single
Cell
Plot
Zoom into tumors with single-cell precision
Intratumor gene expression
Intratumor correlation
Normal vs. tumor gene expression
Bug report
Step #1: Select cell types
Selected cell type:
CAFs (Activated)
Cancer cells
CD4+ T cells
CD8+ T cells
Endothelial cells
Intestinal Epithelial cells
Myeloid cells
NK cells
Pan-B cells
Pan-Fibroblasts
Plasma cells
Regulatory T cells
Smooth Muscle Cells
Reference cell type:
CAFs (Activated)
Cancer cells
CD4+ T cells
CD8+ T cells
Endothelial cells
Intestinal Epithelial cells
Myeloid cells
NK cells
Pan-B cells
Pan-Fibroblasts
Plasma cells
Regulatory T cells
Smooth Muscle Cells
Filter for tissue :
All
Normal
Tumor
Step #2: Select analysis
Differential expression
ⓘ
Select genes to see whether they are up- or downregulated between selected cell types.
Volcano plot
ⓘ
Volcano plot of differential gene expression between selected cell types.
Expression heatmap
ⓘ
A heatmap representation of the differential expression of selected genes between selected cell types.
Step #3: Select gene(s) for differential expression
Gene(s):
Select a gene...
Perform on all cell types
Clear
Step #3: Select genes for expression heatmap
Genes:
Load sample genes
How to cite: Manuscript in submission
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